keyword in microRNA or target gene :
The pre-miRNA of MI0000772
Gene
HGNC MIRN302B
Accession no
MI0000772
ID
hsa-mir-302b
Species
Homo sapiens
Description
Homo sapiens miR-302b stem-loop
Genomic Location
4 : 113789090 - 113789162 : -
View in the Genome Browser
Locate on gene exon/intron/UTR
ENST00000344442 intron - 10
ENST00000308878 intron - 10
ENST00000324052 intron - 11
View the flanking features in the Genome Browser
Pre-miRNA length
73 nt
Comments
Human miR-302a (MIR:MI0000738), miR-302b (MIR:MI0000772), miR-302c (MIR:MI0000773), miR-302d (MIR:MI0000774) and miR-367 (MIR:MI0000775) are clustered on chromosome 4.
2nd structure
[ pdf format ]
Get miRNA's sequence:
 
Related miRNAs
mmu-mir-302 hsa-mir-302a hsa-mir-302b hsa-mir-302c hsa-mir-302d
gga-mir-302a gga-mir-302b gga-mir-302c gga-mir-302d mmu-mir-302b
mmu-mir-302c mmu-mir-302d xtr-mir-302 mdo-mir-302b mdo-mir-302c
mdo-mir-302a mdo-mir-302d
The mature miRNA of MI0000772
Mature name
hsa-miR-302b*
Mature sequence
11| 5'- ACUUUAACAUGGAAGUGCUUUCU -3' |33
Target genes
ENST00000356315 (targeted by hsa-miR-302b*, predicted by TargetScan)
Vacuolar protein sorting-associated protein 13D. [Source:Uniprot/SWISSPROT;Acc:Q5THJ4]
 
     
ENST00000011700 (targeted by hsa-miR-302b*, predicted by TargetScan)
Vacuolar protein sorting-associated protein 13D. [Source:Uniprot/SWISSPROT;Acc:Q5THJ4]
 
     
ENST00000358136 (targeted by hsa-miR-302b*, predicted by TargetScan)
Vacuolar protein sorting-associated protein 13D. [Source:Uniprot/SWISSPROT;Acc:Q5THJ4]
 
     
   
 
The mature miRNA of MI0000772
Mature name
hsa-miR-302b
Mature sequence
47| 5'- UAAGUGCUUCCAUGUUUUAGUAG -3' |69
Target genes
ENST00000240185 (targeted by hsa-miR-302b, predicted by TargetScan)
TAR DNA-binding protein 43 (TDP-43). [Source:Uniprot/SWISSPROT;Acc:Q13148]
 
     
ENST00000240185 (targeted by hsa-miR-302b, predicted by TargetScan)
TAR DNA-binding protein 43 (TDP-43). [Source:Uniprot/SWISSPROT;Acc:Q13148]
 
     
ENST00000167825 (targeted by hsa-miR-302b, predicted by TargetScan)
Rho guanine nucleotide exchange factor (GEF) 10-like isoform 2 [Source:RefSeq_peptide;Acc:NP_001011722]
 
     
   
 
The reference
Literature
1. "Human embryonic stem cells express a unique set of microRNAs"
  Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, Cha KY, Chung HM, Yoon HS, Moon SY, Kim VN, Kim KS
  Dev Biol. 270:488-498(2004).
 

Department of Biological Science and Technology,
Institute of Bioinformatics National Chiao Tung University, Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw

Get Access to [CBST, http://www.life.nctu.edu.tw// CBST, http://life.nctu.edu.tw/ /IBSB, http://bioinfo.nctu.edu.tw/ /BST, http://bio.life.nctu.edu.tw/ /IMMBE, http://bioce.life.nctu.edu.tw] CBST, http://www.life.nctu.edu.tw/ IBSB, http://bioinfo.nctu.edu.tw/ BST, http://bio.life.nctu.edu.tw/ IMMBE, http://bioce.life.nctu.edu.tw 172016 0937119471