keyword in microRNA or target gene :
The pre-miRNA of MI0000261
Gene
HGNC MIRN139
Accession no
MI0000261
ID
hsa-mir-139
Species
Homo sapiens
Description
Homo sapiens miR-139 stem-loop
Genomic Location
11 : 72003755 - 72003822 : -
View in the Genome Browser
Locate on gene exon/intron/UTR
ENST00000334456 intron + 2
ENST00000376450 intron + 1
OTTHUMT00000219840 intron + 2
OTTHUMT00000219839 intron + 2
OTTHUMT00000219845 intron + 3
OTTHUMT00000219841 intron + 1
View the flanking features in the Genome Browser
Pre-miRNA length
68 nt
Comments
2nd structure
[ pdf format ]
Get miRNA's sequence:
 
Related miRNAs
hsa-mir-139 mmu-mir-139 rno-mir-139 ssc-mir-139 lla-mir-139
ppa-mir-139 dre-mir-139 xtr-mir-139 bta-mir-139
The mature miRNA of MI0000261
Mature name
hsa-miR-139
Mature sequence
7| 5'- UCUACAGUGCACGUGUCU -3' |24
Tissue specificity
Bead-array microRNA expression profile
MicroRNA Expression Profiles Classify Human Cancers
  Nature 435, 834-838(9 June 2005)

QPCR microRNA expression profile

 

Target genes
ENST00000323874 (targeted by hsa-miR-139, predicted by TargetScan)
Receptor-type tyrosine-protein phosphatase U precursor (EC 3.1.3.48) (R-PTP-U) (Protein-tyrosine phosphatase J) (PTP-J) (Pancreatic carcinoma phosphatase 2) (PCP-2). [Source:Uniprot/SWISSPROT;Acc:Q92729]
 
     
ENST00000356870 (targeted by hsa-miR-139, predicted by TargetScan)
Receptor-type tyrosine-protein phosphatase U precursor (EC 3.1.3.48) (R-PTP-U) (Protein-tyrosine phosphatase J) (PTP-J) (Pancreatic carcinoma phosphatase 2) (PCP-2). [Source:Uniprot/SWISSPROT;Acc:Q92729]
 
     
ENST00000078545 (targeted by hsa-miR-139, predicted by TargetScan)
Receptor-type tyrosine-protein phosphatase U precursor (EC 3.1.3.48) (R-PTP-U) (Protein-tyrosine phosphatase J) (PTP-J) (Pancreatic carcinoma phosphatase 2) (PCP-2). [Source:Uniprot/SWISSPROT;Acc:Q92729]
 
     
   
 
The reference
Literature
1. "Identification of tissue-specific microRNAs from mouse"
  Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T
  Curr Biol. 12:735-739(2002).
 

Department of Biological Science and Technology,
Institute of Bioinformatics National Chiao Tung University, Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw

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