keyword in microRNA or target gene :
The pre-miRNA of MI0000091
Gene
EMBL AJ421755
HGNC MIRN33
Accession no
MI0000091
ID
hsa-mir-33
Species
Homo sapiens
Description
Homo sapiens miR-33 stem-loop
Genomic Location
22 : 40626894 - 40626962 : +
View in the Genome Browser
Locate on gene exon/intron/UTR
ENST00000361204 intron + 16
OTTHUMT00000075380 intron + 16
View the flanking features in the Genome Browser
Pre-miRNA length
69 nt
Comments
2nd structure
[ pdf format ]
Get miRNA's sequence:
 
Related miRNAs
hsa-mir-33 dme-mir-33 mmu-mir-33 rno-mir-33 gga-mir-33
dps-mir-33 mml-mir-33 ptr-mir-33 ggo-mir-33 ppy-mir-33
mne-mir-33 ppa-mir-33 hsa-mir-33b xtr-mir-33a xtr-mir-33b
ame-mir-33
The mature miRNA of MI0000091
Mature name
hsa-miR-33
Mature sequence
6| 5'- GUGCAUUGUAGUUGCAUUG -3' |24
Tissue specificity
Bead-array microRNA expression profile
MicroRNA Expression Profiles Classify Human Cancers
  Nature 435, 834-838(9 June 2005)

QPCR microRNA expression profile

 

Target genes
ENST00000377083 (targeted by hsa-miR-33, predicted by TargetScan)
Kinesin-like protein KIF1B (Klp). [Source:Uniprot/SWISSPROT;Acc:O60333]
 
     
ENST00000010299 (targeted by hsa-miR-33, predicted by TargetScan)
Protein FAM76A. [Source:Uniprot/SWISSPROT;Acc:Q8TAV0]
 
     
ENST00000373949 (targeted by hsa-miR-33, predicted by TargetScan)
Protein FAM76A. [Source:Uniprot/SWISSPROT;Acc:Q8TAV0]
 
     
   
 
The reference
Literature
1. "Identification of novel genes coding for small expressed RNAs"
  Lagos-Quintana M, Rauhut R, Lendeckel W, Tuschl T
  Science. 294:853-858(2001).
 

Department of Biological Science and Technology,
Institute of Bioinformatics National Chiao Tung University, Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw

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